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Clonality of Streptococcus pneumoniae Isolates in Russia, Circulating from 1980 to 2017

https://doi.org/10.24411/0235-2990-2019-100027

Abstract

The objective of this study was to clarify the intraspecies phylogenetic relationship between pneumococci strains from various geographical locations. Concatenated Multilocus sequence typing (MLST) sequences of six housekeeping genes were chosen for the phylogenetic tree construction. Trees, constructed for concatenated genes, revealed that there is a tendency for a clonal spread of antibiotic resistance. Interestingly, the isolates with novel or circulating mainly in Russia genotypes, described in this study, many are related to successful international clones, with the potential to spread.

About the Authors

I. A. Tsvetkova
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency
Russian Federation


S. S. Belanov
University of Helsinki; Institute of Biotechnology
Russian Federation


V. V. Gostev
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency
Russian Federation


O. S. Kalinogorskaya
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency
Russian Federation


M. O. Volkova
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency
Russian Federation


A. S. Mokhov
Saint Petersburg Information and Analytical Centre
Russian Federation


E. V. Nikitina
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency
Russian Federation


E. L. Kalisnikova
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency
Russian Federation


K. A. Ivanova
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency
Russian Federation


A. A. Volodina
Saint Petersburg Scientific Research Institute of Vaccines and Serums and the Enterprise for the Production of Bacterial Preparations of Federal Medical Biological Agency
Russian Federation


S. V. Sidorenko
Federal State Financed Institution Pediatric Research and Clinical Center for Infectious Diseases under the Federal Medical Biological Agency; North Western State Medical University
Russian Federation


Review

For citations:


Tsvetkova I.A., Belanov S.S., Gostev V.V., Kalinogorskaya O.S., Volkova M.O., Mokhov A.S., Nikitina E.V., Kalisnikova E.L., Ivanova K.A., Volodina A.A., Sidorenko S.V. Clonality of Streptococcus pneumoniae Isolates in Russia, Circulating from 1980 to 2017. Antibiot Khimioter = Antibiotics and Chemotherapy. 2019;64(5-6):22-31. (In Russ.) https://doi.org/10.24411/0235-2990-2019-100027

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ISSN 0235-2990 (Print)