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The Importance of Rapid Methods for Pathogen Identification and Antibiotic Resistance Mechanism Detection for Optimization of Antibiotic Therapy: A Narrative Review

https://doi.org/10.37489/0235-2990-2026-71-5-6-82-96

EDN: EPKZFE

Abstract

Antibiotic resistance represents one of the pressing challenges of contemporary clinical practice, as it contributes to increased mortality, prolonged hospitalization, and a growing economic burden on healthcare systems. This problem is of particular significance in infections caused by ESKAPE pathogens, carbapenem-resistant Enterobacteriaceae, Acinetobacter baumannii, and Pseudomonas aeruginosa, for which the timely selection of rational antibacterial therapy directly affects prognosis. The aim of the present review is to synthesize current evidence on the value of rapid methods for pathogen identification and antibiotic resistance mechanism detection in optimizing antibiotic therapy. The literature search was conducted in PubMed/MEDLINE, eLibrary, CyberLeninka, Google Scholar, Springer Link, and ScienceDirect; a total of 70 publications were included in the analysis. The capabilities of multiplex PCR panels, MALDI-TOF MS, rapid phenotypic antimicrobial susceptibility testing methods, metagenomic sequencing, and ancillary biomarkers are examined. It has been demonstrated that rapid diagnostics can shorten the time to appropriate therapy, accelerate escalation upon detection of resistant strains, facilitate de-escalation, and reduce unnecessary antibiotic use. The most pronounced clinical effect is achieved when rapid diagnostic tests are integrated into antimicrobial stewardship programs involving microbiologists, clinical pharmacologists, and infectious disease specialists. At the same time, data on the impact of rapid diagnostics on mortality rates, length of hospital stay, and economic costs remain heterogeneous, which is attributable to local epidemiological indicators, the availability of technologies, the organization of laboratory workflows, and the quality of clinical interpretation of results.

About the Authors

A. A. Avetisyan
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Arevik A. Avetisyan - Postgraduate Student

Moscow



Z. E. Alekseev
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Zakhar E. Alekseev - Postgraduate Student

Moscow



K. S. Volkova
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Karina S. Volkova - Postgraduate Student

Moscow



P. V. Gerlak
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Polina V. Gerlak - Postgraduate Student

Moscow



R. K. Gushchyan
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Ruzanna K. Gushchyan - Resident Physician

Moscow



M. D. Dulova
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Maria D. Dulova - Resident Physician

Moscow



D. R. Kasparova
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Dayana R. Kasparova - Resident Physician

Moscow



I. I. Kozhevnikov
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Ivan I. Kozhevnikov - Resident Physician

Moscow

 



E. O. Kolnobritskaya
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Elizaveta O. Kolnobritskaya - Resident Physician

Moscow



D. B. Litvak
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Diana B. Litvak - Resident Physician

Moscow



O. I. Mouraov
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Oleg I. Mouraov - Resident Physician

Moscow

 



P. G. Teryaeva
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation, Moscow, Russian Federation
Russian Federation

Polina G. Teryaeva - Resident Physician

Moscow



T. A. Chupina
IM Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation
Russian Federation

Tatiana A. Chupina - Resident Physician

Moscow



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Avetisyan AA, Alekseev ZE, Volkova KS, Gerlak PV, Gushchyan RK, Dulova MD, Kasparova DR, Kozhevnikov II, Kolnobritskaya EO, Litvak DB, Mouraov OI, Teryaeva PG, Chupina TA. The Importance of Rapid Methods for Pathogen Identification and Antibiotic Resistance Mechanism Detection for Optimization of Antibiotic Therapy: A Narrative Review. Antibiotiki i Khimioterapiya = Antibiotics and Chemotherapy. 2026;71(5-6):82-96. (In Russ.) https://doi.org/10.37489/0235-2990-2026-71-5-6-82-96. EDN: EPKZFE

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